| A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | Q | R | S | T | U | V | W | X | Y | Z | |
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1 | CANONIC | Implementers | Links | Notes | ||||||||||||||||||||||
2 | M1 (Izhikevich neurons) | Salvador Dura-Bernal, SUNY Downstate, salvadordura@gmail.com | https://github.com/Neurosim-lab/netpyne/tree/development/examples/M1 http://www.opensourcebrain.org/projects/m1networkmodel | Mouse M1 model with 14 populations; size 300um x 300um x 1350um, has 10,734 Izhikevich cells, 5,029,610 synapses, and cortical depth-dependent connectivity based on published data. | ||||||||||||||||||||||
3 | M1 (detailed HH neurons) | Salvador Dura-Bernal, SUNY Downstate, salvadordura@gmail.com Samuel Neymotin, SUNY Downstate, samnemo@gmail.com Donald Doherty, SUNY Downstate, donald.doherty@icloud.com | https://github.com/Neurosim-lab/netpyne/tree/development/examples/M1detailed no.neurosim.downstate.edu://u/salvadord/Models/m1 https://www.biorxiv.org/content/early/2018/01/24/201707 | Mouse M1 model with 14 populations; size 300um x 300um x 1350um, has 10,171 HH cells (from 2 to 700+ compartments), ~30M synapses, long-range inputs from 7 regions and cortical depth-dependent connectivity based on published data. | ||||||||||||||||||||||
4 | NeuroML import of simple network example | Padraig Gleeson, UCL, p.gleeson@ucl.ac.uk Salvador Dura-Bernal, SUNY Downstate, salvadordura@gmail.com | https://github.com/Neurosim-lab/netpyne/tree/development/examples/NeuroMLImport | 3 Izhikevich cells | ||||||||||||||||||||||
5 | M1 PT corticospinal cell (detailed) | Salvador Dura-Bernal, SUNY Downstate, salvadordura@gmail.com Samuel Neymotin, SUNY Downstate, samnemo@gmail.com | https://github.com/Neurosim-lab/netpyne/tree/development/examples/PTcell https://senselab.med.yale.edu/modeldb/ShowModel.cshtml?model=195615 https://www.ncbi.nlm.nih.gov/pubmed/27760819 | M1 pyramdial tract project (PT) corticospinal cell with 700+ compartments and multiple ionic channels, optimized to reproduce experimental data | ||||||||||||||||||||||
6 | Simple sensorimotor network with STDP and RL learns to drive simple virtual arm | Salvador Dura-Bernal, SUNY Downstate, salvadordura@gmail.com Cliff Kerr, University of Sydney, cliff@thekerrlab.com David Kedziora, University of Sydney, davidkedz@hotmail.com | https://github.com/Neurosim-lab/netpyne/tree/development/examples/RL_arm https://github.com/thekerrlab/compscaling/tree/master/sim https://senselab.med.yale.edu/modeldb/ShowModel.cshtml?model=183014 (related) | 3 Izhikevich populations; 2-stick virtual arm | ||||||||||||||||||||||
7 | Single cell (M1 PT) batch parameter exploration example | Salvador Dura-Bernal, SUNY Downstate, salvadordura@gmail.com | https://github.com/Neurosim-lab/netpyne/tree/development/examples/batchCell | |||||||||||||||||||||||
8 | V1 network with detailed Allen Brain cells (example of saving and loading) | Salvador Dura-Bernal, SUNY Downstate, salvadordura@gmail.com | circuit model of early sensory cortex displaying asynchronous irregular activity with layer-speci | |||||||||||||||||||||||
9 | Simple 2-population network tutorials | Salvador Dura-Bernal, SUNY Downstate, salvadordura@gmail.com | https://github.com/Neurosim-lab/netpyne/blob/development/doc/source/code/tut2.py https://github.com/Neurosim-lab/netpyne/blob/development/doc/source/code/tut3.py https://github.com/Neurosim-lab/netpyne/blob/development/doc/source/code/tut4.py https://github.com/Neurosim-lab/netpyne/blob/development/doc/source/code/tut6.py | tut2 - 1-comp HH tut3 - 2-comp HH tut4 - HH and Izhikevich tut6 - different types of stimulation | ||||||||||||||||||||||
10 | Simple 3-layer, 6-pop tutorial network | Salvador Dura-Bernal, SUNY Downstate, salvadordura@gmail.com | https://github.com/Neurosim-lab/netpyne/blob/development/doc/source/code/tut5.py | simple cortical column, with distance-based conn probablity and delay | ||||||||||||||||||||||
11 | Simple hopfield tutorial network (inhibition and synchrony) | Salvador Dura-Bernal, SUNY Downstate, salvadordura@gmail.com | https://github.com/Neurosim-lab/netpyne/blob/development/doc/source/code/tut7.py | |||||||||||||||||||||||
12 | Simple network batch parameter exploration tutorial | Salvador Dura-Bernal, SUNY Downstate, salvadordura@gmail.com | https://github.com/Neurosim-lab/netpyne/blob/development/doc/source/code/tut8_init.py https://github.com/Neurosim-lab/netpyne/blob/development/doc/source/code/tut8_cfg.py https://github.com/Neurosim-lab/netpyne/blob/development/doc/source/code/tut8_netParams.py https://github.com/Neurosim-lab/netpyne/blob/development/doc/source/code/tut8_batch.py https://github.com/Neurosim-lab/netpyne/blob/development/doc/source/code/tut8_analysis.py | |||||||||||||||||||||||
13 | Artificial cell network tutorial | Salvador Dura-Bernal, SUNY Downstate, salvadordura@gmail.com | https://github.com/Neurosim-lab/netpyne/blob/development/doc/source/code/tut_artif.py | |||||||||||||||||||||||
14 | Importing exisiting cells tutorial | Salvador Dura-Bernal, SUNY Downstate, salvadordura@gmail.com | https://github.com/Neurosim-lab/netpyne/blob/development/doc/source/code/tut_import.py | |||||||||||||||||||||||
15 | Simple network evolutionary parameter optimization tutorial (using Inspyred) | Salvador Dura-Bernal, SUNY Downstate, salvadordura@gmail.com James Chen, SUNY Downstate, james.chen@downstate.edu | https://github.com/Neurosim-lab/netpyne/blob/development/doc/source/code/tut_optimization.py | |||||||||||||||||||||||
16 | Simple HH, Izhi and Hybrid networks (parallelization paper) | Salvador Dura-Bernal, SUNY Downstate, salvadordura@gmail.com Ali Seidenstein, SUNY Downstate, ahseidenstein@gmail.com | https://senselab.med.yale.edu/modeldb/ShowModel.cshtml?model=188544 www.ncbi.nlm.nih.gov/pubmed/27557104 | |||||||||||||||||||||||
17 | Simple network driving robot car (VREP interface) | Salvador Dura-Bernal, SUNY Downstate, salvadordura@gmail.com | no.neurosim.downstate.edu://u/salvadord/Documents/ISB/Teaching/DMC_spring17/code/VREP | Need to upload to github /examples | ||||||||||||||||||||||
18 | Claustrum network | Jing Xuan, JHMI, jlim56@jhmi.edu Erica Griffith, SUNY Downstate, erica.griffith@downstate.edu Salvador Dura-Bernal, SUNY Downstate, salvadordura@gmail.com | no.neurosim.downstate.edu://u/ericag/claus/ | |||||||||||||||||||||||
19 | Dendritic plateau generation in cortical simplified and detailed pyramidal neuron (EEE grant) | Joe Graham, SUNY Downstate, joe.w.graham@gmail.com Peng Gao, UConn, penggao.1987@gmail.com Sergio Angluo, SUNY Downstate, Salvador Dura-Bernal, SUNY Downstate, salvadordura@gmail.com | no.neurosim.downstate.edu://u/graham/projects/eee | |||||||||||||||||||||||
20 | Cortical ensembles based on dendritic plateau generation in PFC (EEE grant) | Sergio Angulo, SUNY Downstate, sergio.angulo@gmail.com Joe Graham, SUNY Downstate, joe.w.graham@gmail.com Peng Gao, UConn, penggao.1987@gmail.com Salvador Dura-Bernal, SUNY Downstate, salvadordura@gmail.com | no.neurosim.downstate.edu://u/sergioangulo/projects/eee | |||||||||||||||||||||||
21 | Ischemia effects on multiscale network with RxD | Ali Seidenstein, SUNY Downstate, ahseidenstein@gmail.com Adam Newton, SUNY Downstate/Yale, adam.newton@yale.edu | no.neurosim.downstate.edu://u/ahs/Ischemia/ | think Ben Tessler's version reproduced original with very minor differences | ||||||||||||||||||||||
22 | CA3 network (Neymotin, Sheriff) | Ben Tessler, SUNY Downstate, btessler92@gmail.com Ernie Forzano, SUNY Downstate, eforzano@gmail.com William Lytton, SUNY Downstate, billl@neurosim.downstate.edu Salvador Dura-Bernal, SUNY Downstate, salvadordura@gmail.com Kazutaka Sekiguchi, SUNY Downstate, kazutaka@neurosim.downstate.edu | no.neurosim.downstate.edu://u/billl/nrniv/ca3netpyne no.neurosim.downstate.edu://u/btessler/ca3 no.neurosim.downstate.edu//u/eforzano/ca3ihdemo https://senselab.med.yale.edu/modeldb/ShowModel.cshtml?model=151282 https://senselab.med.yale.edu/modeldb/ShowModel.cshtml?model=139421 | |||||||||||||||||||||||
23 | Traub thalamocortical network | Padraig Gleeson, UCL, p.gleeson@ucl.ac.uk Vergil Haynes, vrhaynes@asu.edu Salvador Dura-Bernal, SUNY Downstate, salvadordura@gmail.com | https://github.com/OpenSourceBrain/Thalamocortical/tree/master/NeuroML2/pythonScripts/testNetpyne | |||||||||||||||||||||||
24 | STDP in networks of biophysically detailed cells | Anatoly Buchin, Allen Institute, anat.buchin@gmail.com | think no longer using | |||||||||||||||||||||||
25 | Basal Ganglia with biophysically detailed cells | Lucas Koelman, UCD Dublin, lucas.koelman@ucdconnect.ie | ||||||||||||||||||||||||
26 | LFP oscillations in networks | Christian Fink, Ohio Wesleyan University, tcfink@owu.edu | waiting for LFP implementation | |||||||||||||||||||||||
27 | Learning and dendritic computations | Birgit Kriener, University of Oslo (Einevoll lab), birgit.kriener@medisin.uio.no | ||||||||||||||||||||||||
28 | Epilepsy in thalamocortical network (Knox) | Andrew Knox, University of Wisconsin, knox@neurology.wisc.edu Ramazan Tekin, Batman University, Ramazan.Tekin@batman.edu.tr Salvador Dura-Bernal, SUNY Downstate, salvadordura@gmail.com | https://senselab.med.yale.edu/modeldb/ShowModel.cshtml?model=234233 https://github.com/rtekin/myKnoxRepo.git no.neurosim.downstate.edu://u/salvadord/Models/knox | |||||||||||||||||||||||
29 | Schizophrenia in cortical network | Cristoph Metzner, Technical University of Berlin, christoph.metzner@gmail.com Gili Karni, MInerva at KGI, gili.karni@minverva.kgi.edu | port model from Genesis: https://www.frontiersin.org/articles/10.3389/fncom.2016.00089/full | |||||||||||||||||||||||
30 | Spinal cord circuits | Vittorio Caggiano, IBM Research, caggiano@gmail.com | no.neurosim.downstate.edu://u/salvadord/Models/vitto | |||||||||||||||||||||||
31 | Stimulation in thalamocortical network | Ben Latimer, Missouri (Nair lab), LatimerB@missouri.edu Brenyn Jungmann, Missouri (Nair lab), LatimerB@missouri.edu | no.neurosim.downstate.edu://u/salvadord/Models/brenyn | |||||||||||||||||||||||
32 | Fear amygdala circuits | Aliyah Taylor, Princeton/Missouri (Nair lab), Forum | ||||||||||||||||||||||||
33 | Macaque M1 TMS/tDCS stimulation | Aman Aberra, Duke University, aman.aberra@duke.edu | Interested in using M1 model; had several meetings | |||||||||||||||||||||||
34 | CA1 / CA3 network (Bezaire) | Padraig Gleeson, UCL, p.gleeson@ucl.ac.uk Andras Ecker, UCL, ecker.andris@gmail.com Salvador Dura-Bernal, SUNY Downstate, salvadordura@gmail.com Fernando Borges, fernandodasilvaborges@gmail.com | https://github.com/mbezaire/ca1/tree/development/NeuroML2/network https://elifesciences.org/articles/18566 | |||||||||||||||||||||||
35 | Human Neocortical Solver, EEG/MEG | Blake Caldwell, Brown University, blake_caldwell@brown.edu Samuel Neymotin, NKI, samnemo@gmail.com Salvador Dura-Bernal, SUNY Downstate, salvadordura@gmail.com Stephanie Jones, Brown University, stephanie_jones@brown.edu | https://salvi82@bitbucket.org/samnemo/hnn.git http://hnn.brown.edu/doc/index.html | |||||||||||||||||||||||
36 | Cerebellum | Sergio Solinas, University of Pavia, smgsolinas@gmail.com Stefano Masoli, University of Pavia, stefano.masoli@unipv.it | no.neurosim.downstate.edu://u/salvadord/Models/golgi | Sergio will send link to gitlab repo | ||||||||||||||||||||||
37 | LFP in SUA vs MUA | Harry Tran, University of Minnesota, harrytran75005@gmail.com | waiting for LFP implementation | |||||||||||||||||||||||
38 | CA1, memory retrieval, oscillations | Adam Sugi, LASCON18, adamhsugi@gmail.com Angeles Tepper, LASCON18, angelestepper@gmail.com Oussama Sabri, LASCON18, sabri@i3s.unice.fr | https://github.com/angietep/CA1-NetPyNE-model https://senselab.med.yale.edu/modeldb/ShowModel.cshtml?model=123815 http://sisne.org/lasconresources/mod/resource/view.php?id=1072 | reproduced original results | ||||||||||||||||||||||
39 | PFC decision-making network | Enver Oruro, LASCON18, envermiguel@gmail.com Rodrigo Pena, LASCON18, rodrigo.pena@usp.br | http://sisne.org/lasconresources/mod/resource/view.php?id=1065 | |||||||||||||||||||||||
40 | Dentate gyrus network, dopamine modulation | Facundo Rodriguez, LASCON18, frodriguez4600@gmail.com Matías Mugnaini, LASCON18, matiasmugnaini@gmail.com | https://github.com/rodriguez-facundo/LASCON-project https://senselab.med.yale.edu/modeldb/ShowModel.cshtml?model=155568 http://sisne.org/lasconresources/mod/resource/view.php?id=1086 | reproduced original model | ||||||||||||||||||||||
41 | Potjans and Diesmann network neocortical network | Cecília Romaro, LASCON18, cecilia.romaro@usp.br Fernando A. Najman, LASCON18, fanajman@gmail.com | https://github.com/ceciliaromaro/PD_NetPyNE http://sisne.org/lasconresources/mod/resource/view.php?id=1092 http://www.opensourcebrain.org/projects/potjansdiesmann2014 https://www.ncbi.nlm.nih.gov/pubmed/23203991 | |||||||||||||||||||||||
42 | 4-layer M1 network with STDP and RL learns to drive simple virtual arm (IBM paper) | Jaime A. Riascos, LASCON18, jarsalas@inf.ufrgs.br Pablo A de Abreu Urbizagastegui, LASCON18, pabloabur@usp.br Susana Paredes-Zúñiga, LASCON18, sparedesz@ug.uchile.cl | https://github.com/JARS29/LASCON_Project/tree/izhi/pyn http://sisne.org/lasconresources/mod/resource/view.php?id=1078 https://senselab.med.yale.edu/modeldb/ShowModel.cshtml?model=194897 | |||||||||||||||||||||||
43 | V1 network, ACh modulation | Vinicius Lima, LASCON18, vinicius.lima.cordeiro@usp.br Sareh Rostami, LASCON18, rostami.sareh@sbmu.ac.ir Parviz Ghaderi, LASCON18, parviz_gh2@yahoo.com | https://github.com/ViniciusLima94/pd_net_netpyne http://sisne.org/lasconresources/mod/resource/view.php?id=1080 | |||||||||||||||||||||||
44 | Striatal microcircuits (detailed MSNs and FSIs) | Hanbing Song, Franklin and Marshall College, hsong1@fandm.edu Christina Weaver, Franklin and Marshall College, christina.weaver@fandm.edu | Ongoing | |||||||||||||||||||||||
45 | Gentiletti et al. model | Noémie (NEURON Forum) | https://senselab.med.yale.edu/modeldb/ShowModel.cshtml?model=222321&file=/GentilettiEtAl2016/init.hoc#tabs-2 | |||||||||||||||||||||||
46 | Network with gap junctions | Question in forum - ask name and affiliation | ||||||||||||||||||||||||
47 | Owl brain | Brian Fischer, UC Davis, bfischer.su@gmail.com | ||||||||||||||||||||||||
48 | Olfactory bulb and auditory cortex | Sharon Crook, ASU, Sharon.Crook@asu.edu Michle Migliore, Palermo | ||||||||||||||||||||||||
49 | Heart myocite network with gap junctions | Sergio Solinas, University of Pavia, smgsolinas@gmail.com | ||||||||||||||||||||||||
50 | Rehabilitation in rat motor cortex | Max Murphy, University of Kansas, m053m716@kumc.edu | https://m053m716.github.io/ | fitting multi-unit recordings to network model | ||||||||||||||||||||||
51 | Cerebellum model | Chaitanya Medini, University of Pavia, chaitanya.medini@unipv.it / mach512@gmail.com, | https://github.com/mach512/NetPyNE_CerebellumModel | |||||||||||||||||||||||
52 | Network with 100 neurons, astrocytes,calcium wave | Samuel Fernando, Universidade Federal do ABC Brazil, fernandofs051086@gmail.com | ||||||||||||||||||||||||
53 | Hypothalamic aggression circuits (?) | Yuxin Tong, NYU Langone, Yuxin.Tong@nyulangone.org | ||||||||||||||||||||||||
54 | Apteronotus leptorhynchus spinal cord | Dan Hartman, Northeastern University, hartman.da@husky.neu.edu | ||||||||||||||||||||||||
55 | Multiscale model of epilepsy in cortex (with RxD) | Wilson Truccolo, Brown University, wilson_truccolo@brown.edu | ||||||||||||||||||||||||
56 | Network with ECG converted to input spikes | Ilknur Kayikcioglu, Karadeniz Technical University, ilknurkayikcioglu@gmail.com | ||||||||||||||||||||||||
57 | Macaque Auditory cortex | Erica Y Griffith, SUNY Downstate Sam Neymotin, Nathan Kline Institute | https://github.com/suny-downstate-medical-center/A1 | |||||||||||||||||||||||
58 | Robot control | Renan Moioli, renan.moioli@gmail.com, Federal University Rio Grande | ||||||||||||||||||||||||
59 | Network with noise | Simon Fallnich, simon.fallnich@gmx.de | ||||||||||||||||||||||||
60 | Network with custom ionic concentrations | Lyssa Blood, lyssawblood@gmail.com | ||||||||||||||||||||||||
61 | Zebrafish spinal cord circuits | Martha Bagnall, bagnall at wustl dot edu, Washington University | ||||||||||||||||||||||||
62 | Gamma oscillations in retina / V1 circuit | Natalia Matos, Federal University of Rio Grande Brain Institute, nataliacbmatos@gmail.com Roberto Budzinski, Federal University of Paraná, roberto.budzinski@gmail.com | ||||||||||||||||||||||||
63 | Visual flash effect on retinal circuits | Shahab A. Zarei, Shiraz University of Medical Sciences, sh.zarei@sbmu.ac.ir Silvio José Vitor Ferreira, University of Sao Paulo, silviojvferreira@gmail.com Xiangyu Zhou, University of Queensland - Brain Institute, xiangyu.zhou@uq.net.au | ||||||||||||||||||||||||
64 | M1 corticostriatal and corticospinal cell interactions | June Jung, SUNY Downstate, jjnyc8910@gmail.com | ||||||||||||||||||||||||
65 | Ketamine effects in Amygdala and PFC | Ernest Cote, SUNY Downstate, Ernest.Cote@downstate.edu | ||||||||||||||||||||||||
66 | Effects of ketamine in thalamcortical network | Mohamed Sherif, Yale University, mohamed.sherif@yale.edu Moustafa Zakaria Khalil, Yale University, moustafa.zakaria@hotmail.com | ||||||||||||||||||||||||
67 | Parameter optimization using supercomputers | Subhashini Sivagnanam, San Diego Supercomputng Center, sivagnan@sdsc.edu | ||||||||||||||||||||||||
68 | Spinal dorsal horn network | Kazutaka Sekiguchi, SUNY Downstate, kazutaka@neurosim.downstate.edu | https://senselab.med.yale.edu/modeldb/ShowModel?model=168414#tabs-1 | |||||||||||||||||||||||
69 | Motorneurons and spinal cord network | Ricardo Gonçalves Molinari, State University of Campinas, molinari@gmail.com Marina Oliveira, University of Sao Paulo, oliveiramarina23@gmail.com | ||||||||||||||||||||||||
70 | Amygdala, hippocampus and PFC circuitry | Paula Rodrigues, Federal University of ABC, paulaxgr@gmail.com Evelina Torres, National Autonomous University of Mexico, evelina.tg@gmail.com | https://senselab.med.yale.edu/modeldb/ShowModel?model=150288#tabs-1 | |||||||||||||||||||||||
71 | Ephaptic interactions in neuronal networks | Gabriela Melo, Federal University of ABC, gabimelo42@gmail.com Renata Biazzi, University of Sao Paulo, renata.biazzi@usp.br | ||||||||||||||||||||||||
72 | Cryptogenic epilepsy in cortical network | Matías Lorenz, Balseiro Institute, gama.lorenz@gmail.com Ana Aquiles, National Autonomous University of Mexico, anaaquiles@ciencias.unam.mx | ||||||||||||||||||||||||
73 | EEG alpha rythms during development | Amaya Miquelajáuregui, University of Puerto Rico, amaya.miq@upr.edu Arthur Valencio, State University of Campinas, arthur_valencio@physics.org Paulo Passos, Federal University of Rio de Janeiro, paulorcpassos@gmail.com | ||||||||||||||||||||||||
74 | Zebrafish circuits involved in escape behavior | Ana Paula Sandes de Souza, University of Brasilia, anapaulasandes.s@gmail.com Laura Freire Lyra, Federal University of Minas Gerais, lauraflyra@gmail.com | ||||||||||||||||||||||||
75 | SMARTAgent, a cortical network that learns to play games using RL | Haroon Anwar, Nathan Kline Institute, haroon.anwar@gmail.com | Ongoing. Private copy at https://github.com/haroonanwar/SMARTAgent | SMARTAgent (A spiking network model of Visual and Motor Cortices interfaced with opengym AI games to learn how to play games using Reinforcement learning.) | ||||||||||||||||||||||
76 | fMRI-based whole-brain modeling to study epilepsy and autism | Suk Hun Hong, Child Mind Institute, SukJun.Hong@childmind.org | ||||||||||||||||||||||||
77 | Somatosensory (S1) 6 layer network | Siddhartha Mitra, SUNY Downstate, siddhartha.mitra@downstate.edu | https://bbp.epfl.ch/nmc-portal/welcome | |||||||||||||||||||||||
78 | Epilepsy high-freq oscillations during sleep | Logan Bayer, Gonzaga University | ||||||||||||||||||||||||
79 | Anatomical-Functional Mapping of Enteric Neural Circuits | Parvin Zarei (pzarei@unimelb.edu.au), University of Melbourne | ||||||||||||||||||||||||
80 | 100-cell network with square pulses | Kelli Hancock (forum) | ||||||||||||||||||||||||
81 | HPC benchmark network | Andreas Neef | ||||||||||||||||||||||||
82 | Model of new fetal neuron | Tade Souiaia, SUNY Downstate | ||||||||||||||||||||||||
83 | Blue Brain Project S1 model | Fernando Borges fernandodasilvaborges@gmail.com | ||||||||||||||||||||||||
84 | Hippocampus CA1 model | HBP Migliore Lab | ||||||||||||||||||||||||
85 | Cardiac nervous system | Suranjana Gupta, SUNY DMC, gupta8suranjana@gmail.com; Jessica Feldman, SUNY DMC, jessica@neurosim.downstate.edu; Lakshmi Kuttippurathu, Thomas Jefferson University, lakshmikc@gmail.com | https://github.com/suny-downstate-medical-center/icns-netypne/ | Basic single compartment model of an RAGP principal neuron currently comprising multiple ion channels, calcium dynamics and excitatory synaptic input, based on published model implemented in MATLAB/Python | ||||||||||||||||||||||
86 | Hay L5PC model | Angela Mitrovska <an.mitrovska@gmail.com> | ||||||||||||||||||||||||
87 | Batch simulations | Mostafa Khalil (forum) | ||||||||||||||||||||||||
88 | L5B PT cell | Arpit Shrimankar <arpitshrimankar@gmail.com> | ||||||||||||||||||||||||
89 | RxD model | Adam Mergenthal <mergenth@usc.edu> | ||||||||||||||||||||||||
90 | Electric field model | zhao.zhihe96@gmail.com <zhao.zhihe96@gmail.com> | ||||||||||||||||||||||||
91 | Cerebellum model | Jhielson M. Pimentel, <jm210@hw.ac.uk>, CDT student in RAS at ECR Sergio Solinas | ||||||||||||||||||||||||
92 | Extracellular ACS | Monica Bell Vila, monica.bellvila@mail.utoronto.ca, University of Toronto | ||||||||||||||||||||||||
93 | Brainstem to cardiac ICM circuit | Lakshmi Kuttippurathu, lakshmi.kuttippurathu@jefferson.edu, Thomas Jefferson University
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94 | Mouse Somatosensory cortex microcircuit | Salvador Dura-Bernal, SUNY Downstate, salvadordura@gmail.com Fernando Borges, SUNY Downstate, fernandodasilvaborges@gmail.com | https://github.com/suny-downstate-medical-center/S1_mouse | |||||||||||||||||||||||
95 | Rat Somatosensory cortex microcircuit | Salvador Dura-Bernal, SUNY Downstate, salvadordura@gmail.com Fernando Borges, SUNY Downstate, fernandodasilvaborges@gmail.com | https://github.com/suny-downstate-medical-center/S1_netpyne | |||||||||||||||||||||||
96 | Full scale Hippocampus CA1 model | Fernando Borges, SUNY Downstate, fernandodasilvaborges@gmail.com Lavínia Mitiko Takarabe, UFABC, mailmitiko@gmail.com | https://github.com/FernandoSBorges/CA1_netpyne | |||||||||||||||||||||||
97 | Modulatory effects of inhibition on persistent activity in a toy cortical microcircuit model | Katherine Doxey, Arizona State University, kedoxey@asu.edu Sydney Leaman, Kings College London, sydney.leaman@kcl.ac.uk | https://github.com/kedoxey/netpyne-project | |||||||||||||||||||||||
98 | Mismatch Negativity in cortical network | Cristoph Metzner, Technical University of Berlin, christoph.metzner@gmail.com Gili Karni, MInerva at KGI, gili.karni@minverva.kgi.edu | port model from Genesis: https://www.frontiersin.org/articles/10.3389/fncom.2016.00089/full | |||||||||||||||||||||||
99 | Microcircuit of layer 5 pyramidal neurons | Roy Ben-Shalom <rbenshalom@ucdavis.edu> | ||||||||||||||||||||||||
100 | Ephaptic coupling | Nooshin Abdollahi, Steven A. Presco |